Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAKEYADALYDSLGHSVLICDRDVYIAVSGSSKKDYLNKSISEMLERTMDQRSSVLESDAKSVQLVNGIDEDMNSYTVGPIVANGDPIGAVVIFSKDQTMGEVEHKAVETAAGFLARQMEQ
2K1N Chain:C ((1-50))
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVD-DEKIILKKYKP-------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2K1N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9924 for 210 contacts (-47.3/contact) +
2D Compatibility (PS) -5791 + (NN) -3577 + (LL) 8488
1D Compatibility (HY) -7600 + (ID) 1750
Total energy: -20154.0 ( -95.97 by residue)
QMean score : 0.375
(partial model without unconserved sides chains):
PDB file :
Tito_2K1N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K1N-query.scw
PDB file :
Tito_Scwrl_2K1N.pdb
: