Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFDLNEQGKLDVRRAVGTNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGVGVLVNPDNTILAAGGFIIQLMPGT-DDETITKIEQRLSQVEPISKLIQKGLTPEEILEEVLGEKPEILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTTR |
1VQ0 Chain:B ((20-285)) | ---------FDHKVRFSIVRMREVVEEARNRHALSYLATVVLGRALIGAALVTPWLAEKERWTLDIEGNGPIRRVVAQSTSEFTVRGYVANPKVELPLNEKGKFDVAGAIG-QGVLRVVRDLGLKTPFVSQVPLVSGEIAEDLAYYFAVSEQIPSAFSIGVLVDSDGVKI-AGGFAVQIIDRTLEQEKVEMIEKNIKNLPSISKLFQEA-EPLDVLERIFGEKVGFVETAEIKYKCDCNREKAKNALLVLDKKELEDMRKE-GKGEVVCKWCNTRYVFS------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143483 for 2146 contacts (-66.9/contact) +
2D Compatibility (PS) -28533 + (NN) -5056 + (LL) 2320
1D Compatibility (HY) -27600 + (ID) 5450
Total energy: -207802.0 ( -96.83 by residue)
QMean score : 0.564
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