Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRTIWTIILGALLVCCIAVAYTLTKSQAGASSSGESIATIGGKSVTREEWLKEMED---------------QYGKSTLEDMINVRVVEQLAKKNKLKISKSEVDREFLLIKAVNN--SF------YED-EHTTEKEWKDQIRYNILLEDLLT---RDIDISNKELESFYNKNKELYQFDDSYRIRHIVVKDEE-----------EAREVLKELK-GGSSFEAVAAERSTDRYTSPYGGDLGFVTEASDNI---PSAYIEEAKTLKEDEWSQEPIKVS-NGYAIIQLKEKLKARTFSFDEVKDQIRRQIAMDQLGDKAT--VKTLWKEADVSWFYGEKSTK |
| 3NRK Chain:A ((50-347)) | ----------------------------------LNRVIATVGTVSISELDLDDATEKYNRLQKHLKHEDYRKSFRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMGITNRKQFEKTMETSSGMPFELWVTELPYQIKKGQLLQLKIAVPPPNEQEIRSWYNQNKDKV--GFEIRYRIISIAPENDSIQEENRLYKEVSEIRKSILADPSSFALIAGSPRNDPALRARRGMVEWISSF--DLYKYSKITATIAAPLPNGGVS-EVFRDERKRYCILKIEGKRP---TPMENLRGGIQNILYRDKEEDTFHRWLKESRAEIPIQIFDEAYR-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -30050 for 1654 contacts (-18.2/contact) +
2D Compatibility (PS) -27614 + (NN) -10651 + (LL) 3972
1D Compatibility (HY) -11200 + (ID) 2550
Total energy: -78093.0 ( -47.21 by residue)
QMean score : 0.528
|
|
|