Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
2OO7 Chain:B ((1-216))
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQIQPLLDFYSEKGYLANVNGQRDIQDVYADVKDLLGGLK-
General information:
TITO was launched using:
RESULT:
Template:
2OO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83772 for 1701 contacts (-49.2/contact) +
2D Compatibility (PS) -23959 + (NN) -18173 + (LL) 64
1D Compatibility (HY) -30000 + (ID) 10700
Total energy: -166540.0 ( -97.91 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_2OO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OO7-query.scw
PDB file :
Tito_Scwrl_2OO7.pdb
: