Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIICKTPRELGIMREAGRIVALTHEELKKHIKPGISTKELDQIAERFIKKQGAIPSFKGYNGFRGSICVSVNEELVHGIPGSRVLKDGDIISIDIGAKLNGYHGDSAWTYPVGNISDDDKKLLEVTEESLYKGLQEAKPGERLSNISHAIQTYVENEQFSVVREYVGHGVGQDLHEDPQIPHYGPPNKGPRLKPGMVLAIEPMVNAGSRYVKTLADNWTVVTVDGKKCAHFEHTIAITETGFDILTRV
3TB5 Chain:B ((1-246))
MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATCCSINDEICHGFPRKKVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYGVVRDFVGHGIGPTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGLSCQYEHSLAITKEGPRILT--
General information:
TITO was launched using:
RESULT:
Template:
3TB5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101818 for 2175 contacts (-46.8/contact) +
2D Compatibility (PS) -27224 + (NN) -16358 + (LL) 292
1D Compatibility (HY) -22800 + (ID) 5600
Total energy: -173508.0 ( -79.77 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_3TB5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TB5-query.scw
PDB file :
Tito_Scwrl_3TB5.pdb
: