Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKDDVIEVEGTIVETLPNAMFKVELENGHTVLAHVSGKIRMHFIRILPGDKVTVELSPYDLTRGRITYRYK
2RCN Chain:A ((47-118))
-------PAEGIVISRFGM-HADVESADGEVHRCNIRRTIR----SLVTGDRVVWRPGK-------------
General information:
TITO was launched using:
RESULT:
Template:
2RCN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30780 for 271 contacts (-113.6/contact) +
2D Compatibility (PS) -5333 + (NN) -1232 + (LL) 2268
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -36777.0 ( -135.71 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_2RCN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RCN-query.scw
PDB file :
Tito_Scwrl_2RCN.pdb
: