Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMDSMIIGKYVPGTSLVHRLDPRTKLITIFLFVCIVFLANNVQTYALLGLFTIGVVSLTRVPFSFLMKGLKPIIWIVLFTFLLHILMTHEGPIIFQIGFFKVYEGGLVQGIFISLRFVYLILITTLLTLTTTPIEITDGMEQLLNPLKKLKLPVHELALMMSISLRFIPTLMEETDKIMKAQMARGVDFTSGPVKERVKAIVPLLVPLFVSAFKRAEELAVAMEARGYQGGEGRTKYRKLVWTGKDTSVIVSLIVLAALLFFLRA |
4OM3 Chain:A ((10-126)) | ------------------------------------------------------------------------------------------------------------------------------------KFTIPESLDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQTEIAKRLNTICAQVIPFLSQEHQQQVAQAVERAKQVTMAELNAIIGQQQLQAQHLSH---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6978 for 499 contacts (14.0/contact) +
2D Compatibility (PS) -12487 + (NN) -4059 + (LL) 14984
1D Compatibility (HY) -800 + (ID) 550
Total energy: 4066.0 ( 8.15 by residue)
QMean score : 0.081
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