Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNALVAHNSKAWDKKVETGNEWTVAVEQQVIEQAKKGNWDIRVTPMKDVPKDWFPPIKGLKVLCLASGGGQQGPVLAAAGADVTVLDNSEKQLNQDRMIAER-------DGLTIHTVKGSMDDLSVFNDESFDVIVHPVANVFV--------ENVLPVWKEAYRVLKRNGILISGFVNPVVFLFD----------------------TELEQQGVLKVKHSIPYADPEDLPKHKVKKLIENNEALEFGHSLEDQIKGQIDAGFIVTGFYEDKGGFVLDQ------YIHTYSATRSVKV |
| 1XVA Chain:A ((1-292)) | --VDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64684 for 1765 contacts (-36.6/contact) +
2D Compatibility (PS) -26276 + (NN) -723 + (LL) 548
1D Compatibility (HY) 1600 + (ID) 1900
Total energy: -91435.0 ( -51.80 by residue)
QMean score : 0.271
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