Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIE---YLDKTY-EVTVPTDKIAITGSVESMEDAKLLDVH--PQGAISFSGKFPDMFKDITDKAEPTGEKMEPNIEKILEMKPDVILASTKF-PE------KTLQKISTA-GTTIPVSH-IS-SNWKENMMLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKAKDSKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVKA-AKAQELSSLEKLSEMNPDHIFVQFSDDENA---DKPDALKDLEKNPIWKSLKAVKEDHVYVNSVDPLAQGGTAWSKVRFLKAAAEKLTQN |
| 4N01 Chain:A ((41-333)) | -----------------------------------GTSVTWSETFDGTKTDFAVKSAPTHA-VSMSQATTEMMLQLGLDDKMAGTAFKEEEIYPPLQAAYDKVKVLS-DKWPSYEVFMSVKPDFATGWPDSFSKRAIPADKMISQKVNIWIPESMLSTKADLETNFSDMIKLGEIFGVKPKAEEWVADQRKTLAAIQNKLKDL-PRKRVFIYDSEDGQPFTAF-EGYTTN-ILKLIGADNVMSGLGVDKTWAKGSWETVIAQNPDYIIIADYGNSIRNDDDFQQKIEKIKANPQLQDITAVKEGHFIRVKLSEITPGVRTV-DA--LKRLAEEIHG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45392 for 2139 contacts (-21.2/contact) +
2D Compatibility (PS) -29751 + (NN) -17101 + (LL) 3588
1D Compatibility (HY) -4800 + (ID) 2500
Total energy: -95956.0 ( -44.86 by residue)
QMean score : 0.525
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