Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNAVIYQPVQIEYLKKTSDLFSEQQLADSFVLIFHLKGNGYISIGTNTNPLQKKTLYVCPPNETFGFTPAADGHIDACIIRLLSYIKETGQDIFTPCTESELAKLKLMNVSHIENLAVRLQELAALWNESSQLSQLKCVIEVQSLIYDLFTASLSDQTDTHSAIEKTKHYIETHADTKITLAQLSQMAGISAKHYSESFKKWTGQSVTEFITKTRITKAKRLMAKSNCKLKEIAHQTGYQDEFYFSRIFKKYTGCSPTSYMKKRRKKIAAYGRGTMGHLIPLHHIPFAAALHPKWTSYYYQH---YSTDIPVQLSAYRFNEKWEENLYTLSQAEPDVIVSMDSISPEEQDRLNRIAEVMYLPSE-ESWRTHFLQTASFLKEESEAEKWLADYDQQTTAAKKTLQHVQGLRFLFLRLHKQNFYLAHNRSVREVFFGDLGFSSATTADTP--SEQAISLENIANYQADCMMLFLFKEPE---TIAYYQQLQQTEAWQNLSAVRDNRVYLLSLDPWNE-YSACGHERIVQQTVSLLSGDCP |
| 3TNY Chain:A ((17-296)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVVTVEHAMGK--TEVP-ANPKRVVILTNEGTEALLELGVKPVGAVKSWTGDP-WYPHIKDKMKDVK------VVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKFYAKALNKEKEGQKVVADYESRMKDLKGKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKDDFAERNVSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWNTAGGVIAANLLLDDIEKRFV---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134704 for 2252 contacts (-59.8/contact) +
2D Compatibility (PS) -28264 + (NN) -10397 + (LL) 19332
1D Compatibility (HY) -11600 + (ID) 2500
Total energy: -168133.0 ( -74.66 by residue)
QMean score : 0.357
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