Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKYFGTDGVRGVANSELTPELAFKVGRFGGYVLTKD-KQRPKVLIGRDTRISGHMLEGALVAGLLSIGAEVMRLGVISTPGVSYLTKAMDAEAGVMISASHNPVQDNGIKFFGGDGFKLSDEQEAEIERLMDEPEDKLPRPVGADLGLVN--DYFEGGQKYLQFLKQTADEDFTGIH---VALDCANGATSSLATHLFADLDADVSTMGTSPNGLNINDGVGSTHPEA----LSAF---VKEKNADLGLAFDGDGDRLIAVDEKGNIVDGDQIMYICSKH-LKSEGRLKDDTVVSTVMSNLGFYKALEKEGIKSVQTAVGDRYVVEAMKKDGYNVGGEQSGHLIFLDYNTTGDGLLSAIMLMNTLKATGKPLSELAAEMQKFPQLLVNVRVT-DKY----KVEENEKVKAVISEV---EKEMNGDGRILVRPSGTEPLVRVMAEAKTKELCDEYVNRIVEVVRSEMGLE |
| 1WQA Chain:D ((1-454)) | MGKLFGTFGVRGIANEKITPEFAMKIGMAFGTLLKREGRKKPLVVVGRDTRVSGEMLKEALISGLLSVGCDVIDVGIAPTPAVQWATKHFNADGGAVITASHNPPEYNGIKLLEPNGMGLKKEREAIVEELFF--KEDFDRAKWYEIGEVRREDII---KPYIEAIKSKVDVEAIKKRKPFVVVDTSNGAGSLTLPYLLRELGCKVITVNAQPDGY-----FPARNPEPNEENLKEFMEIVKALGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLKEKG---GGLLVTTVATSNLLDDIAKKHGAKVMRTKVGDLIVARALYENNGTIGGEENGGVIFPEHVLGRDGAMTVAKVVEIFAKSGKKFSELIDELPKYYQIKTKRHVEGDRHAIVNKVAEMARERGYTVDTTDGAKIIFEDGWVLVRASGTEPIIRIFSEAKSKEKAQEYLNLGIELLEKAL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143391 for 3983 contacts (-36.0/contact) +
2D Compatibility (PS) -46504 + (NN) -23515 + (LL) -32
1D Compatibility (HY) -27600 + (ID) 8000
Total energy: -249042.0 ( -62.53 by residue)
QMean score : 0.484
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