Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVSLSLSSLLTLFFIMLMASGISGLLFLHPRVPLSFVRIHIGILALPLLVSLLILANSGVSGNVGPWHLDSLACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFTLFTFT-TGAASMTWLSGDLRLMVLFWGATLVGLTLLIRLNSAWQVASEAAKISGRLFLLSWFSLFFAMMWLFHATGQWQLSLVVTNESLAGLGEWERTGIQLLIVLAVIIPAAQWPFQRWLVESIVAPTPVSAIMHAGLVNAGGIILTRFSPLFHGGIASIILLLLASISVLIGTGISLVQVDYKRQLVGSTIGQMGFMLIQCALGAYIAAIIHLILHGLFKATLFLQAGSAVGRHEVSTRTNERTSYLWVMAGRILSLVIGVAFWLTAPGDGYHLISALILGWSLSVSWDQLVAFGEGRIGRIAGLTVLGGAALVYFIIHHLFYKWLHTTIFQSVQPPMSAVMIVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKSVESHPDYLKQYIS-- |
1EMS Chain:A ((10-440)) | ----MATGRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATDCEYMEKYRELARKH-NIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRLG--LSICYDVRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHWETLLRARAIENQCYVVAA--------AQTGAHNPKRQSYGHSMVVDPWGAVVAQ----------------CSERVDMCFAEIDLSYVDTLREMQPVFSHR-----------------RSDLYTLHINEKSSETGGLKFARFNIPADH------IFYSTPHSFVFVN-----LKPVTDGHVLVSP------------KRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTTICVQD-----------------GKDAGQ-------TVPHVHIHILPRRAGDF-PRSNEQMAEEAVVYRNLM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -408535 for 3392 contacts (-120.4/contact) +
2D Compatibility (PS) -42813 + (NN) 2799 + (LL) 9516
1D Compatibility (HY) 4800 + (ID) 2500
Total energy: -436733.0 ( -128.75 by residue)
QMean score : 0.131
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