Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIEVFKALSNESRLQILQWLKEPDRHFAPHEGIDMNTIGVCVSQITDKLKMTQSTASQYLTILLRAGLIKAERIGKYTYYKRDEEAIGKLADFLKTEI
1R1U Chain:A ((16-92))
--VTEIFKALGDYNRIRIMELLS---------------VSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLK------
General information:
TITO was launched using:
RESULT:
Template:
1R1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46332 for 516 contacts (-89.8/contact) +
2D Compatibility (PS) -8433 + (NN) -3782 + (LL) 1444
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -63453.0 ( -122.97 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_1R1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R1U-query.scw
PDB file :
Tito_Scwrl_1R1U.pdb
: