Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDRVKDFDLPELAVHLQPHGAVMIDRKSMFYFRLSGRGAQLAFLLSKNKNLHKTARIWEIMKKEEMSADQLKEELSAHPFTEAWTEGLLDQPLHVSGSLDSYLPISCTLQLTNACNLSCSFCYASSGKP-------YPEELSSEQWILVMQKLAAHGVADITLTGGEAKLIKGFKELVVVASSL-FT-NVNVFSNGLNWRDEEVELLSHLGNVSVQISIDGMD-NTHDQLRGRKGGFKESMNTIKKLSEANIPVIVAMTINES-NADEVSDVVEQCANAGAFIFRAGKTLSVGRATEGF-K-ALD-IDFEEMVQIQLREARH---KWGDRL-NIID-W-E-H---EESSFTTDFCTPGYLAWYIRADGYVTPCQL-ED-------LPLGHI----LEDSMADIGSPARLLQLKCEAKNCKCIGKIELSEPDLPFQKEVKAGIQE |
| 1TV8 Chain:A ((11-312)) | -------------------------------------------------------------------------------------------------------RPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKH-GQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIE-IRFIEFMDVGNDNGWDFSKVVTKDEMLTMIE-QHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTC-TRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIR------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102095 for 1972 contacts (-51.8/contact) +
2D Compatibility (PS) -28892 + (NN) -18146 + (LL) 10960
1D Compatibility (HY) -14400 + (ID) 2350
Total energy: -154923.0 ( -78.56 by residue)
QMean score : 0.354
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