Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLWKVLKIVFVSLAALVLLVSVSVFIYHHFQLNKEAALLKGKGTVVDVDGKKMNVYQEGSGKDTFVFMSGSGIAAPAYEMKGLYSKFSKENKIAVVDRAGYGYSEVSH-DDRDIDTVLEQTRKALMKS-GNKPPYILMPHSISGIEAMYWAQKYPKEIKAIIAMDIGLPQQYVTYKLSGVDRLKVRGFHLLTSIGFHRFIPSAVYNPEVIRQSFLTDEEKEIYKAINFKQFFNADMEHELLQSYQNGSKSVNLPAPKETPVLILDAVSDQNRHSKYAIQNRKDYEAFAAQFNTADIKELRGTHSIYLYQPDQIYKLSMEFMRKVR |
| 4MEA Chain:A ((60-189)) | -----------------------------------------GLSSKFIESEGVKLHYVEGGSKGTPIVFIHGFGSTW--KMWEPVMLSYMKDHKVIAIDLPGLGQSGPILNDDYSAENTSKILIGAIKKIAGKG-PIYYVSHDLGNTASYPLVANNQGYIKKAVFMDSPIPDRA--------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43081 for 1053 contacts (-40.9/contact) +
2D Compatibility (PS) -14225 + (NN) -11057 + (LL) 16416
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -58047.0 ( -55.13 by residue)
QMean score : 0.570
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