Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------MRLNRQFIRTQLIAQNILSKNAPAKRENATENPAAVLEKAYSRLKSQSSTGGINQFN----YSKTSVSGNSGT--FSKVYQSANDRTVTDT---GEETVIQSQNPYESES------------DIRIKILDE-----KYSRMNAINKTKSD----PLGYIKDKYQNSK-----SPYFR---SDLSAAERQAAYDNET-------EWLFKGKAQNYNLQDAVF--RNVTFHGEVEAENEKVYQ-------------RGQVN-QQLQVLLNRNHI---HIPEGTELTFTITPIDYQVRVSGTDDQ-----DLIKQIEQVLQSGDNSKELFLHIMKSQSSDSAQ----FSEEAYKKYQAAREMYEVTGYHLKDLE--------------------VIDGRYVTP----EGRDLMDVYKEELEKDPVQKQTASYAISYYR-SELSKIAEAGY--NAIPDFILSIDYSNGSLRDVGQSKSYGTGDTGWLEALKRQTGVNY---------------------------------------------------------------------------- |
2O1U Chain:A ((34-661)) | MMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTVGFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKVWDWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYNDTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 39306 for 2456 contacts (16.0/contact) +
2D Compatibility (PS) -40545 + (NN) 7222 + (LL) 0
1D Compatibility (HY) -13600 + (ID) 2850
Total energy: -10467.0 ( -4.26 by residue)
QMean score : 0.244
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