Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFLFTNGKVLWGAVIAAFILSIVFYPFLPTQMPIHYDVANSPDLTVNKLAGTVMLPVLMVVFAWARKINWQFVFAVYILLICHIVVLCLAL
2M8S Chain:B ((1-24))----------------------------RYHRRGGYDVENEEKVKLGMTNSH---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2M8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 47 -56 -1.19 -2.33
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.33

3D Compatibility (PKB) : -1.19
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.33
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_2M8S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2M8S-query.scw
PDB file : Tito_Scwrl_2M8S.pdb: