Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITLFQCLYLILFSFICYQGAAAFSHSTAASWLAAALGAAAAGLYIWNTKRVWKHCSSGLCAWIAVIQVMSVGVVLIGTDIMPVLCVIAIFAGCEGLRIGQSALQARLSDQIDKLTQAEQHANQMLIDVRSRNHDTMKHITAIKSA-Q---PKADTQAYIQNWADQYSQYDRFLKGE-------------------NAYVAGVLYDFLEKARASNVSVSLHMHTPLSSLPFSPADQVSLVGNILENALDSAAEAREKAEIKLETSLRSGLYVLTCENSTPGMDPKVLDTIYQSFGRSTKNGAHEGMGTYIIQKLVKGAFGRLDFTYRHP-IFRLEIKIPFQK
4BIX Chain:A ((79-295))---------------------------------------------------------------------------------------------------------------------------SQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHT-----KIEVGFAVDKDGITITVDDDGPGVSPEDREQIFR-PFYRTD---GTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLY-


General information:
TITO was launched using:
RESULT:

Template: 4BIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 724 -84985 -117.38 -459.38
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -117.38
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.417

(partial model without unconserved sides chains):
PDB file : Tito_4BIX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BIX-query.scw
PDB file : Tito_Scwrl_4BIX.pdb: