Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------MRQEELTIHKALPADGDWKSLLFQPLPERDHY-----------------------ETAQGLSFSRLAGQILGTPIDETDYYNELYELSVNDRITILSETLDKTIEPETFQKLQHIHSINQKEKGLSVSRFVAFLDGEKLIAKHSNPLMHRHLRKALMTLLHTFADSHEKGLNHPDFRRVLLDVSKFSLNHLNPWLEKTDIEREMPKVVWYGDATKSQLYFLYYLMLVGCDVLLFHPAGTDQLALVDPKQELGFTEKLPDVSELQPFPKEKPDRKSTV-AYRSTKEIEHVLNH---------EESMLYKPW-----------QFRDHTPVSVTLKTTYDELFLITKERAFIR-PNFKADKHSIEIPNVFAKIMGVSKDNKEYWNRLHTLADYQETEMVRSFPFTEEIKSNYQFHYSHALDQEGNIDPDKLMASNVWQYKQL-----PAGVQTAIAKTISRMCRYPRLKALHQEQVKDVQIYLFKQTTNLPANLLKLIQMFDYAQTVPKLV--LYHTEMSGGLTRSDAAALLFLNEIGIDIIIYNPPGHQDIEQFIEE-DQYDIHWLDDMVFQQDYKE-PSLVKRLFRTITQK-------------
5E1J Chain:A ((32-686))QKAAALVDLAEDGIGLPVEILDRYYFIFTRLDLIWSLNYFALLFLNFFEQPLWCEKNPKPSCKDRDYYYLGELPYLTNAESIIYEVITLAILLVHTFFPISYEGSRIFW-TSRLNLVKVACVVILFVDVLVDFLY-FRIAPYVRVIIFILSIRELRDTLVLLSGMLGTYLNILALWMLFLLFASWIAFVMFEDTQQGLTVFTSYGATLYQMFILFTTSNNPDVWIP--AYKSSRWSSVFFVLYVLIGVYFVTNLILAVVYDSFKEQLAKQVSGMDQMKRRMLE-KAFGLIDSDKNGEIDKNQCIKLFEQLTNYRTLPKISKEEFGLIFDELDDTRDFKINKDEFADLCQAIALRFQKEYHSALSQQLRAFVRSPNFGYAISFILIINFIAVVVETTLDIEESSAQ----KPWQVAEFVFGWIYVLEMALKIYTYGFENYWREGANRFDFLVTWVIVIGETATFITPFSNGEWIRYLLLARMLRLIRLLMNVQRYRAFIATFITLIPSLMPYLGTIFCVLCIYCSIGVQVFGGLNKKLFETELAEDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMESYKDLTGTWWSITYFVSFYVITILLLLNLVVAFVLEAFFTELDLEEEEK


General information:
TITO was launched using:
RESULT:

Template: 5E1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1594 -146055 -91.63 -276.62
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -91.63
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.079

(partial model without unconserved sides chains):
PDB file : Tito_5E1J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5E1J-query.scw
PDB file : Tito_Scwrl_5E1J.pdb: