Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------MQATVHESKQSIMQRILTVFVFTLLIATVGLFIGQFVPVALMLPLSILEVAMIILAFWMRRRKAV--------GYAFVYTFAFVSGITLFPIVSHYASI-----AGAYVVLEAFGSTFVIFAVLGTIGAKMKKDLSFLWSFLLVAVLALAVVGIFNIFSPL--------NSAAMMAYSVIGTIVFSLYILYDLNQIKHRHITEDLIPVMALSLYLDFINLFINLLRFFGILSSDD
4HYF Chain:A ((14-240))GTENLYFQSMLNTSGSGTILIDLSPDDKEFQSVEEEMQSTVREHRDGGHAGGIFNRYNILKIQKVCNKKLWERYTHRRKEVSEENHNHANERMLFHGSPFVNAIIHKGFDERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPVHKDRS-CYICHRQLLFCRVTLGKSFLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQ------------------------AYPEYLITYQIMRPEG


General information:
TITO was launched using:
RESULT:

Template: 4HYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 932 -146266 -156.94 -773.89
target 2D structure prediction score : 0.19
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -156.94
2D Compatibility (Sec. Struct. Predict.) : 0.19
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.147

(partial model without unconserved sides chains):
PDB file : Tito_4HYF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HYF-query.scw
PDB file : Tito_Scwrl_4HYF.pdb: