Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDFEIRFLSFYVIQVEGKDEQANKQFKHFQTL--DTGEFEESELKDFLDGELKKIVKRKADRHPQSEQVPTKIGHFIVEPGHELDSNPNYNMFNRARLAETKEDFNELSEQFV------RTYLDTSAVRGGVFL------VASAVPRKYFDESFVFIMKCDFEPKVARISDASSLIKKVEMAITTKNMKSIQYPYMPEEGMVEEGELKIH------QASHARYFEDFLKFVEYGE-SMPEIMKNQVM-NMVQEHVYETFE-------DNSEELKQFEHDIEIWEASEKREIQERLDT-HQVIEASAQIIEHTPEAQLKMKVGETEIKGLLADFGDSIHLAKVNG-----------RYVALIEAETI--SFEKGSSPVEF---YKPEGLHEVIERIRNKTEQD---------
4D10 Chain:B ((34-447))VDLENQYYNSKALK-EDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFK--LTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTQLLEI-YALEIQMYTAQKNNKKLKALYEQSLHIKS-AIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREH--IEELLRNIRTQVLIKLIKPY-TRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA


General information:
TITO was launched using:
RESULT:

Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1226 -90289 -73.65 -259.45
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -73.65
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.203

(partial model without unconserved sides chains):
PDB file : Tito_4D10.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D10-query.scw
PDB file : Tito_Scwrl_4D10.pdb: