Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTVLELKNVTKNIRGRTIIDDLSFTIREGEVFGFLGPNGAGKTTTIRMMVGLMKLSKGD--VLICGQSITKEYAKAIKHIGAIVENPELYKFLSGYKNLQQFARMVKGVTKE----KIDEVVELVGLTDRIHDKVKTYSLGMRQRLGLAQCLLHDPKVLILDEPTNGLDPAGIREIRDHLKKLTRERGMAVIVSSHLLSEMELMCDRIAILQKGKLIDIQNVKDENIDENDTYFFQVEQPSEAATVLNQYDLLSKTNGVEIKLAKEEVPAVIELLVMQQIRIYEVKVITKSLEDRFLEMTGETKEEVQHA
4P32 Chain:B ((1-215))--ATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHL-RDSGLGVLITDHNVRETLAVCERAYIVSQGHLI---------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4P32.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1077 -127334 -118.23 -609.25
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : -118.23
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.577

(partial model without unconserved sides chains):
PDB file : Tito_4P32.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P32-query.scw
PDB file : Tito_Scwrl_4P32.pdb: