Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVYITYGTADFLKTIVQKHPSENILLMQGQENAILIHETNGDTVFQAPHAYEVIDQVGEIKHPGFAVLNNIAVTQEGRPLFENRFKNRAGKVENEPGFEAIRVLRPLDSDTYVILTLWETESAFQDWQQSGSYKEAHKKRDTSAGIDTTSIFSRPSYVTTYFAVE
4FVC Chain:E ((1-166))MKVYITYGTADFLKTIVKKHPSENILLMQGQENAILIHETSGDTVFQAPHAYEVIDQVGEIKHPGFAVLANIAVTQEGRPLFENKFKNRAGKVENEPGFEAIRVLRPLDSDTYVILTLWETERAFQDWQQSDSY---------------TSIFSRPSYVTTYFAVE


General information:
TITO was launched using:
RESULT:

Template: 4FVC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 722 -96429 -133.56 -638.60
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain E : 0.96

3D Compatibility (PKB) : -133.56
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.96
QMean score : 0.623

(partial model without unconserved sides chains):
PDB file : Tito_4FVC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FVC-query.scw
PDB file : Tito_Scwrl_4FVC.pdb: