Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLF-EITHQPELCAYVTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPEQDVPYVL---ETIKLLVNEQLNVPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIEAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE----NVPLIMFGVGASHLAGDWHDLPLDVVGLDWRLGIDEARSKGITK-TVQGNLDPSILLAPWEVIEQKTKEILDQGM---ESDGFIFNLGHGVFPDVSPEVLKKLTAFVHEYSQNKKMGQYS
4ZR8 Chain:B ((14-360))-------NDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDYVMNAVSTIRSALGGQ--VPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHALLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDGRRIPVIVFTKGGGQWLEPMITTGADALGLDWTTPLNTARTTVAGRVALQGNLDPAVLYGSAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYS---------


General information:
TITO was launched using:
RESULT:

Template: 4ZR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1945 -224344 -115.34 -669.68
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -115.34
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.506

(partial model without unconserved sides chains):
PDB file : Tito_4ZR8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZR8-query.scw
PDB file : Tito_Scwrl_4ZR8.pdb: