Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQLSKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENRYYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS 2Y1R Chain:J ((4-98)) ---------------------------------------------------------------------------------------------------------------------------EQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENRYYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

General information: TITO was launched using: RESULT: Template: 2Y1R.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 449 -65442 -145.75 -688.86 target 2D structure prediction score : 0.68 Monomeric hydrophicity matching model chain J : 0.77 3D Compatibility (PKB) : -145.75 2D Compatibility (Sec. Struct. Predict.) : 0.68 1D Compatibility (Hydrophobicity) : 0.77 QMean score : 0.782

(partial model without unconserved sides chains): PDB file : Tito_2Y1R.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2Y1R-query.scw PDB file : Tito_Scwrl_2Y1R.pdb: