Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIYTVTLNPSVDYIVHVEDFTVGGLNRSSYDTKYPGGKGINVSRLLKRHHVASKALGFVGGFTGEYIKTFLREENLETAFSEVKGDTRINVK-LKTGDETEINGQGPTISDEDFKAFLEQFQSLQEG-DIVVLAGSIPSSLPHDTYEKIAEACKQQNARVVLDISGEALLKATE--MKPFLMKPNHHELGEMFGTAITSVEEAVPYGKKLVEQ----GAEHVIVSMAGDGALLFTNEAVYFANVPKGKLVNSVGAGDSVVAGFLAGISKQLPLEEAFRLGVTSGSATAFSEELGTEEFVQQLLPEVKVTRL
2JGV Chain:B ((22-284))-ILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGGELGQFIAKKLDHADIKHAFYNIKGETRNCIAILHEGQQTEILEQGPEIDNQEAAGFIKHFEQLLEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGATLQTVLENPYKPTVIKPNISELYQLLNQPL---DESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAI--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1254 -129307 -103.12 -507.09
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -103.12
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.482

(partial model without unconserved sides chains):
PDB file : Tito_2JGV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JGV-query.scw
PDB file : Tito_Scwrl_2JGV.pdb: