Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNALTEKRTRG-SMLWDYLTTVDHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPL-LFALMNAVVPLQIGARDVSFPFLNALGFWLFFFGGIFLNLSWFL-GGAPDAGWTSYASLSLHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVIPVFARKRLFGYSSMVFAIVLIGFLGFMVWVHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTGVMLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHETMGKISFVLFFIGFHLTFFIQHFVGLMGMPRRVYTFLPG-QGLETGNLISTIGAFFMAAAVILLLVNVIWTSVK-GEYVGADPWHDGRTLEWTVSSPPPEYNFK-----QLPFVRGLDPLWIEKQAGHKSMTPAEPVDDIHMPNGSILPLIIS---FGLFVAAFGLLYRSDYAWGLPVIFIGLGITFITMLLRSVIDDHGYHIHKEELPNDDKGVKA
2YEV Chain:D ((12-604))------------WAVLWDLLTTVDHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFSAQSES-GVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVASTFARKPLFGYRQMVWAQMGIVVLGTMVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMTGRMYDERLGRLHFWLFLVGYLLTFLPQYALGYLGMPRRYYTYNADIAGWPELNLLSTIGAYILGLGG-LVWIYTMWKSLRSGPKAPDNPW-GGYTLEWLTASPPKAHNFDVKLPTEFPSER---PLYDWKKKG-VELKPEDPA-HIHLPNSSFWPFYSAATLFAFFVAVAALPVPNVWMW----VFLAL---FAYGLVRWALEDEYSH---------------


General information:
TITO was launched using:
RESULT:

Template: 2YEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 3123 -496164 -158.87 -855.45
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain D : 0.84

3D Compatibility (PKB) : -158.87
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.431

(partial model without unconserved sides chains):
PDB file : Tito_2YEV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YEV-query.scw
PDB file : Tito_Scwrl_2YEV.pdb: