Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAVVEIGDDRG-RIDLVNPEILEKSGEQTGI-EGCLSFPNVYGDVTRADYVKVRAFNRQGKPFILEARGFLARAVQHEMDHLDGVLFTSKISKYYTEDELADMEG
3K6L Chain:B ((2-148))-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGE-TGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLS-------------


General information:
TITO was launched using:
RESULT:

Template: 3K6L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 718 -70167 -97.72 -483.91
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -97.72
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_3K6L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3K6L-query.scw
PDB file : Tito_Scwrl_3K6L.pdb: