Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPEGKIIKALSGFYYVLDESEDSDKVIQCRGRGIFRKNKITPLVGDYVVYQAENDKEGYLMEIKERTNELIRPPICNVDQAVLVFSAVQPSFSTALLDRFLVLVEANDIQPIICITKMDLIEDQDTEDTIQAYAEDYRNIGYDVYLTSSKDQDSLADIIPHFQDKTTVFAGQSGVGKSSLLNAISPELGLRTNEISEHLGRGKHTTRHVELIHTS-GGLVADTPGFSSLEFTDIEEEELGYTFPDIREKSSSCKFRGCLHLKEPKCAVKQAVEDGELKQYRYDHYVEFMTEIKDRKPRY
1U0L Chain:B ((26-299))------------------EDEETGERILCKLRGKFRLQNLKIYVGDRVEYTPDETGSGVIENVLHRKNLLTKPHVANVDQVILVVTVKMPETSTYIIDKFLVLAEKNELETVMVINKMDLY-DEDDLRKVRELEEIYSGL-YPIVKTSAKTGMGIEELKEYLKGKISTMAGLSGVGKSSLLNAINPGLKLR-------------TTTTAQLLKFDFGGYVVDTPGFANLEINDIEPEELKHYFKEFGDK--QCFFSDCNHVDEPECGVKEAVENGEIAESRYENYVKMFYELLGRR---


General information:
TITO was launched using:
RESULT:

Template: 1U0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1238 -138845 -112.15 -534.02
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -112.15
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.523

(partial model without unconserved sides chains):
PDB file : Tito_1U0L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1U0L-query.scw
PDB file : Tito_Scwrl_1U0L.pdb: