Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVQII-FDSKTGNVQRFVNKTGFQQIR-KVDEMDH--VDTPFVLVTYTTN----FGQVPASTQSFL--EKYAHLLLGVAASGNKVWGDNFAKSADTISRQYQVPILHKFELSGTSKDVELFTQEVERVVTKSSAKMDPVK
3N3A Chain:D ((23-139))--QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIE---------------------


General information:
TITO was launched using:
RESULT:

Template: 3N3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 482 -63391 -131.52 -592.43
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain D : 0.73

3D Compatibility (PKB) : -131.52
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_3N3A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N3A-query.scw
PDB file : Tito_Scwrl_3N3A.pdb: