Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERHY--YTYLIKEEFANHYFGRESVMFELFQDYHWTSLEKQQYEM--TEKQIQYITQPIPILHMHQRLKMNLNKTDYRQLDYIYRIA-LPKAKGHATFMMKEHMIEIVASGDYEAE---TIFFEVLRKVSPCFLAMDFNSKRYGWLNPVKERNFV----------
1D2Z Chain:B ((1-150))LSSKYSRNTELRRVE--------DNDIYRLAKILDENSCWRKLMSIIPKGMDVQACSGA-GCLNFPAEIKKGFKYTAQDVFQIDEAANRLPPDQSKSQMMIDEWK----TSGKLNERPTVGVLLQLLVQ-AELFSAADFVALD--FLNESTPARPVDGPGALISLE


General information:
TITO was launched using:
RESULT:

Template: 1D2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 584 19969 34.19 151.28
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : 34.19
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.337

(partial model without unconserved sides chains):
PDB file : Tito_1D2Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D2Z-query.scw
PDB file : Tito_Scwrl_1D2Z.pdb: