Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRVLVVDDAKFMRVKIREILEEANYIIAGEAADGEQAADLYKKLRPDLVTMDITMPVKNGIKALRDILTFDPKAKVIMCTAMRQQRIVTEAIELGAKDFIVKPFEETKVLEAVSRVMGH
3TMY Chain:B ((4-118))--RVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKV---


General information:
TITO was launched using:
RESULT:

Template: 3TMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 592 -80628 -136.20 -701.11
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain B : 0.89

3D Compatibility (PKB) : -136.20
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.641

(partial model without unconserved sides chains):
PDB file : Tito_3TMY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TMY-query.scw
PDB file : Tito_Scwrl_3TMY.pdb: