Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQNPSKAEIKEILQRSKRIAVVGLSDRPDRTSHMVSKAMQDA-GYEIIPVNPTIDEALGVKAVSSLKEIDGPIDIVNVFRRSEQLPGVAEEFLETDAPVFWAQ-QG---------LVNEEAYQMLKEKGRTVIMDLCIKVAHAVTK
2CSU Chain:A ((2-154))--------LDYFF-NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNCVGIMNTH--


General information:
TITO was launched using:
RESULT:

Template: 2CSU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 597 -8566 -14.35 -69.08
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -14.35
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.570

(partial model without unconserved sides chains):
PDB file : Tito_2CSU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CSU-query.scw
PDB file : Tito_Scwrl_2CSU.pdb: