Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGNTMCPKMESAFSLLGKRWNGLIIHVLM---DGPKRFKEITETIPMISQKMLAERLKELEQNEIVERQVLPETPVKVIYTLTEKGTALQAVFQEMQAWADQFCEPGDTVCEEEK
4HQE Chain:B ((7-110))----VCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLKTITPRALSLKLSELAQWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYVDLTD-------


General information:
TITO was launched using:
RESULT:

Template: 4HQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 321 -8946 -27.87 -88.57
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -27.87
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_4HQE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HQE-query.scw
PDB file : Tito_Scwrl_4HQE.pdb: