Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPTEIYVDGASAGNPGPSGIGIFIKHE--GKAESFSIPIGVHTNQEAEFLALIEGMKLCATRGYQ----SVSFRTDSDIVERATE-LEMVKNITFQPFVEEIIRLKAA-FPLFFIKWIPGKQNQKADLLAKEAIRLNEKN
3U3G Chain:A ((6-135))----IYTDGGARGNPGPAGIGVVITDEKGNTLHESSAYIGETTNNVAEYEALIRALEDLQMFGDKLVDMEVEVRMDSELIVRQMQGVYKVKEPTLKEKFAKIAHIKMERVPNLVFVHIPREKNARADELVNEAI------


General information:
TITO was launched using:
RESULT:

Template: 3U3G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 558 -19001 -34.05 -155.74
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -34.05
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.465

(partial model without unconserved sides chains):
PDB file : Tito_3U3G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3U3G-query.scw
PDB file : Tito_Scwrl_3U3G.pdb: