Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVFDVWKSLKKGEVHPVYCLYGKETYLLQETVSRIRQTVVDQETK-D-----------------FNLSVFDLEE----DPLDQAIADAETFPFMGERRLVIVKNPYFLTGEKKKEKIEHNVSALESYIQSPAPYTVFVLLAPYEKLDERKKLTKALKKHAFMMEAKELNAKETTDFTVNLAKTEQKTIGTEAAEHLVLLVNGHLSSIFQEIQKLCTFIGDREEITLDDVKMLVARSLEQNIFELINKIVNRKRTESLQIFYDLLKQNEEPIKIMALISNQFRLILQTKYFAEQGYGQKQIASNLKVHPFRVKLAMDQARLFSEEELRLIIEQLAVMDYEMKTGKKDKQLLLELFLLQLLKRNEKNDPHY
1NJG Chain:A ((38-248))-------GLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSR--------HSFNALLKTLEEPPEHVKFLLATT--DP---QKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGD--GQVSTQAVSAML----------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1NJG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 851 909 1.07 4.81
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 1.07
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_1NJG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NJG-query.scw
PDB file : Tito_Scwrl_1NJG.pdb: