Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHVKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETGK
1JL3 Chain:C ((4-139))---KIIYFLCTGNSCRSQMAEGWAKQYL--EWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLC-------------VKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETGK


General information:
TITO was launched using:
RESULT:

Template: 1JL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 595 -69773 -117.27 -576.64
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain C : 0.95

3D Compatibility (PKB) : -117.27
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.95
QMean score : 0.675

(partial model without unconserved sides chains):
PDB file : Tito_1JL3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JL3-query.scw
PDB file : Tito_Scwrl_1JL3.pdb: