Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------MLLITPDELKSYSVFESVKTRPDELLKQDILEATADIILKVG----HDFSDAEYIPLPETVRLALLKL-SQFYALINGDESIIKGYTTEKIGDYSYTLGDGSSLQKPDVYALIKDY--VKPADPDLEGIEAKVRMRSI---
4KTW Chain:A ((1-160))MKKILAINFSTASKKGEGTGYAFRKDGQVYVGSIKAYNPKKTAWERTFDIVNAIKDIIDEFDLKGYHLAIETPIMGRNRKHSITLANCNGYFIGAIDGLVNGYTFIDNSKWCSYHL-ISGKREQRKEESLELLKATGLVDSNCKDDNIADAYNILTYCEHL


General information:
TITO was launched using:
RESULT:

Template: 4KTW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 482 26593 55.17 204.56
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 55.17
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.219

(partial model without unconserved sides chains):
PDB file : Tito_4KTW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KTW-query.scw
PDB file : Tito_Scwrl_4KTW.pdb: