Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNNDKKKEVQRKYREEIKKKKQKNEDNKNFIKETIIVVTIIVLFIFFTYTLQGF
2K8F Chain:B ((1-39))MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQA----------------


General information:
TITO was launched using:
RESULT:

Template: 2K8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 21 4376 208.36 112.19
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain B : 0.51

3D Compatibility (PKB) : 208.36
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_2K8F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2K8F-query.scw
PDB file : Tito_Scwrl_2K8F.pdb: