Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTLVIVIHPNLETSVVNKTWMNRLKQEKDITVHDLYGEYPNFIIDVEKEQQLLLDHERIVFQFPMYWYSSPALLKQWEDDVLTHGWAYGTGGTKLHGKELLLAISLGAQESDYQAGGEYNITISELIRPFQVTANYIGMRFLPAFTQYGTLHLSKEDVKNSA----ERLVDYLKAEH
3L9W Chain:B ((240-411))---LIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDV--LSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEWQEAH-


General information:
TITO was launched using:
RESULT:

Template: 3L9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 748 -120531 -161.14 -717.45
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -161.14
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.616

(partial model without unconserved sides chains):
PDB file : Tito_3L9W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L9W-query.scw
PDB file : Tito_Scwrl_3L9W.pdb: