Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKNPVVIGIAGGSGSGKTSVTRSIYEQF-------KGHSILMIQQDLYYKD--QSHLPFEERLNTNYDHPLAFDNDYLIEHIQDLLNYRPIEKPIYDYKLHTRSEETVHVEPKDVIILEGILVLEDKRLRDLMDIKLYVDTDADLRIIRRIMRDINERGRSIDSVIEQYVSVVRPMHNQFVEPTKRYADIIIPEGGQNHVAIDLMVTKIQTILEQNAIL
2JEO Chain:A ((21-235))--MRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRD----LEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDI--


General information:
TITO was launched using:
RESULT:

Template: 2JEO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 940 26277 27.95 129.44
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : 27.95
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.490

(partial model without unconserved sides chains):
PDB file : Tito_2JEO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JEO-query.scw
PDB file : Tito_Scwrl_2JEO.pdb: