Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDLKQYVTIVPDYPKEGVQFKDITTLMDKGDVYRYATDQIVEYAKEKQIDLVVGPEARGFIIGCPVAYALGVGFAPVRKEGKLPREVIKVDYGLEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLIELSYLDGRNKLEDYDILTLMKY
4M0K Chain:C ((31-190))--LKQAIRTVPDFPEPGIQFKDITPVLGHPELLRLAIEALLEPFQEQEITKVVGIESRGFILGGMLAHHLDAGFVPVRKKGKLPYQTLAESYQLEYGTDTIEMHIDAIEPGDRVLIHDDVIATGGTAEATIRLVERAGGEVVGCAFLIELTGLQGRKRLPAH--------


General information:
TITO was launched using:
RESULT:

Template: 4M0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 773 -116427 -150.62 -727.67
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain C : 0.83

3D Compatibility (PKB) : -150.62
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.554

(partial model without unconserved sides chains):
PDB file : Tito_4M0K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M0K-query.scw
PDB file : Tito_Scwrl_4M0K.pdb: