Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------MMPRTIIEKIWDQHIVKHGEGKPD------LLYIDLHLIHEVTSPQAFEGLRQKGRKVRRPQNTFATMDHNIPT----VNRFEIKDEVAKRQVTALERNCEEFGVRLADLHSVDQGIVHVVGPELGLTLPGKTIVCGDSHTSTHGAFGALAFGIGTSEVEHVLSTQTLWQQRPKTLEVRVDGTLQKGVTAKDVILAVIGKYGVKFGTGYVIEYTGEVFRNMTMDERMTVCNMSIEAGARAGLIAPDEVTFEYCKNRKYTPKGEEFDKAVEEWKALRTDPGAVYDKSIVLDGNKISPMVTWGINPGMVLPVDSEVPAPESFSAEDDKKEAIRAYEYMGLTPHQKIEDIKVEHVFIGSCTNSRMTDLRQAADMIKGKK---VADSVRAIVVPGSQSVKLQAEKEGLDQIFLEAGFEWRESGCSMCLSM---NNDVVPEGERCASTSNRNFEGRQGKGARTHLV--SPAMAAMAAIHGHF-----VDVRKFYQEKTVV--------------------------------
1ACO Chain:? ((2-528))RAKVAMSHFEPHEYIRYDLLEKNIDIVRKRLNRPLTLSEKIVYGHLDDPANQEIERGKTYLRLRPDRVAMQDATAQMAMLQFISSGLP-KVAVPSTIHCDHLIEAQLGGEKDLRRAKDINQEVYNFLATAGAKYGVGFWRP---GSGIIHQIILEN-YAYPGVLLIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWELKCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMATICNMGAEIGATTSVFPYNHRMKKYLSK---TGRADIANLADEFKDHLVPDSGCHYDQLIEINLSELKPHINGPFTPDLAHP-----------------------VAEVGSVAEKEGWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDGYAQVLRDVGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFNPETDFLTGKDGKKFKLEAPDADELPRAEFDPGQDTYQHPPKDSSGQR


General information:
TITO was launched using:
RESULT:

Template: 1ACO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2602 61783 23.74 140.10
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 23.74
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.381

(partial model without unconserved sides chains):
PDB file : Tito_1ACO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ACO-query.scw
PDB file : Tito_Scwrl_1ACO.pdb: