Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVEQIMK------RDVITLTKTDTLETAICKLKEFHIRHLPVVDEERHVIGMITDRDMKQASPSIFEENKRSLFLTRSVDSIMKKDVVCAHPLDFVEEISAVFYEHGIGCLPVVHHQKLIGILTKTDLLRTFVKLTGADQPGSQIEIKVNDITKSLAEISSLCQDLQVKILSVLVYPHDDPGVKVLVFRVKTMNPLPFLQALQRNGHHVVWPSEQRDLL
4FRY Chain:B ((9-137))--VAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDGD-DIAGIVTERDY--ARKVVLQE--RSSKATR-VEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDGGKLIGLISIGDLVKSVI----ADQ-------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4FRY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 544 3660 6.73 29.76
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : 6.73
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_4FRY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FRY-query.scw
PDB file : Tito_Scwrl_4FRY.pdb: