Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASFQSFGIPGQLEVIKKALDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYKKDGTMFWNELNIDPMEIEDKTYFVGIQNDITKQKEYEKLLEDSLTEITALSTPIVPIRNGISALPLVGNLTEERFNSIVCTLTNILSTSKDDYLIIDLSGLAQVNEQTADQIFKLSHLLKLTGTELIITGIKPELAMKMNKLDANFSSLKTYSNVKDAVKVLPIM
2PR5 Chain:B ((6-131))--------------------DHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYKKDGTMFWNELNIDPMEIEDKTYFVGIQNDITKQKEYEKLLEDSLTEITAL-------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 479 -29282 -61.13 -232.40
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : -61.13
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.625

(partial model without unconserved sides chains):
PDB file : Tito_2PR5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PR5-query.scw
PDB file : Tito_Scwrl_2PR5.pdb: