Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCPLMAENHEVIEEGNSSELPLSAEDAKKLTELAENVL-QGWD----V---QAEKIDVIQGNQMALVWKVHTDS---------GAVCLKRIHRPEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPFELT---VKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGEN------EQIWVIDLDTVSFDLPIRDLRKMIIPLLDTTG-------------VWDDETFNVMLNAYESRAPLT-------------EEQKQVMFIDMLFPYELYDVIREKYVRKSALPKEELESAFEYERIKANALRQLI
4DA5 Chain:A ((81-429))-------------------EQ----PEPRTRRRAYLWCKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLY---AEAMVLESVMFAILAERSL-GPKLYGIFP----------QGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWL-FGTMEKYLKEVLRIK-----FT-EESR--IKKLHK-------LLSYNLPLELENLRS-----LLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAK---------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1007 21311 21.16 78.35
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 21.16
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.394

(partial model without unconserved sides chains):
PDB file : Tito_4DA5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DA5-query.scw
PDB file : Tito_Scwrl_4DA5.pdb: