Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKIIVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECLILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL
4IF4 Chain:C ((3-201))--KVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKP-DLILMDL-LMEDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRGESVFEPEVLVKMRNRMKKRA-----ELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYA------


General information:
TITO was launched using:
RESULT:

Template: 4IF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 889 -108492 -122.04 -545.19
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain C : 0.78

3D Compatibility (PKB) : -122.04
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_4IF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IF4-query.scw
PDB file : Tito_Scwrl_4IF4.pdb: