Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------MKKLVLIGGGYGNMRVLHRLLPNQLPDDVSITLIDRNPYHCLKTEYYALAAGTISDHHIRVSFPEHPR-----LDVQYGDITSIDIVQKQVLFQDREP--------------------ISYDDAIIGLGCEDKYHNVPGAPEFTYSIQTIDQSRETYQKLNNLSANA--------------TVAIVGAGLSGVELASELR------------ESRDDLNIILFDRGNLILSSFPERLSKYVQKWFEEHGVRIINRANITKVEEGVVYNHD---------DPISADAIVWTAGIQPNKVVRDL----DVEKDAQGRIVLTPHHNLPGDEHLYVVGDCASLPHAPSAQLAEAQAEQIVQILQKRWNGEALPESMPQFKLK----------GVLGSLGKKAGFGLVADRPLIGRVPRMLKSGLLWMYKHHNG----------------------------
4G9K Chain:A ((1-471))MKVIDPQHSDKPNVLILGSGWGAISFLKHIDTKKY----NVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKIDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDFFKGL


General information:
TITO was launched using:
RESULT:

Template: 4G9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1895 -41 -0.02 -0.12
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -0.02
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_4G9K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G9K-query.scw
PDB file : Tito_Scwrl_4G9K.pdb: