Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------------------------------------------------------------------------------MREEEKKTSQVKKLQQFFRK-------------RWVFPAIYLVSAAVILTAVLWYQSVSNDEVKDQLA-DNGGNSAYDNNDDAVEVGKSMENVAMPVVDSENVSVVKKFYETDAAKEEKEAALVTYNNTYSLSKGIDLAEKDGKDFDVSASLSGTVVKAEKDPVLGYVVEVEHADGLSTVYQSLSEVSVEQGDKVKQNQVIGKSGKNLYSEDSGNHVHFEIRKDGVAMNPLNFMD--KPVSSIEKAATQETEESIQQSSEKKDGSTEKGTEEKSGEKKDDSTDKSGSKESSTTEDTEQS
3SLU Chain:A ((8-371))GVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYRHLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTLRSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLIYDSLYFHGQQVAAGDILAAEVVKGGTRHQAFYYRSDKGGNYYDED-----GRVLQGFNIEPLVYTRISSPFGYRMHP------------ILHTWRLHTGIDYAAPQGT--PVRASADGVITFKGRKGGYGNAVMIRHANGVETLYAHLSA-FSQAQGNVRGGEVIGFVGS--TGRSTGPHLHYEARINGQPVNPVSVALPTPELTQADKAAFAAQKQKADALLARLR------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3SLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 941 59076 62.78 262.56
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 62.78
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.283

(partial model without unconserved sides chains):
PDB file : Tito_3SLU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SLU-query.scw
PDB file : Tito_Scwrl_3SLU.pdb: