Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------MNPETMNKTLISISKWGKATGILFII--MGAITALSGAFFFLIGAVPGVLQIISGIFLMRSAREAGQMAEHNSGQSEDLMLENYAKFVKMQGIYLIVSIAVSILAIIAFFIFLMLGIADGLFSDTYSTY--------
3ZFJ Chain:A ((12-130))SYIDGDQAGQKAENLTPDEVSKREGINAEQIVIKITDQGYVTSHGDHYHYYNGKVP-----------------------YDAIISEELLMKDPNYQLKDSDIVNEIKGGYVIKVDGKYYVYLK----DAAHADNIRTKEEIKRQKQ


General information:
TITO was launched using:
RESULT:

Template: 3ZFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 437 -10564 -24.17 -105.64
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -24.17
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.096

(partial model without unconserved sides chains):
PDB file : Tito_3ZFJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZFJ-query.scw
PDB file : Tito_Scwrl_3ZFJ.pdb: